Bacterial Infection ICD-10-CM Codes

Bacterial Infection ICD-10-CM Codes

Learn about ICD-10-CM codes for bacterial infections some billing tips, symptoms, treatments, and prevention methods.

By Wynona Jugueta on Jul 16, 2025.

Fact Checked by Karina Jimenea.

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What bacterial infection ICD-10 codes can I use?

Bacterial infections are caused by harmful bacterial agents that can invade various parts of the body and lead to numerous infectious and parasitic diseases. Other bacterial intestinal infections conditions range from skin infections to systemic illnesses such as gram negative sepsis or toxic shock syndrome.

The A49 category is used for viral infections of unspecified site. Please note that type 1 excludes other forms such as bacterial agents causing diseases classified elsewhere (B95–B96), chlamydial infection NOS (A74.9), meningococcal infection NOS (A39.9), rickettsial infection NOS (A79.9), and spirochetal infection NOS (A69.9).

The basic code for this is A49.9 - Bacterial infection, unspecified. This is meant to be used on patients confirmed to have a bacterial infection, but the specific kind of bacteria hasn’t been identified.

Once you have identified the specific kind of bacteria that caused the infection, please use the appropriate ICD-10 code from the following:

  • A49.01 – Methicillin susceptible Staphylococcus aureus infection, unspecified site: Applies to MSSA-related bacterial diseases without an identified site.
  • A49.02 – Methicillin resistant Staphylococcus aureus infection, unspecified site: Represents MRSA, a serious cause of diseases classified under resistant bacterial infections, without a known location.
  • A49.1 – Streptococcal infection, unspecified site: Includes Streptococcus pneumoniae infections when the site is not recorded.
  • A49.2Haemophilus influenzae infection, unspecified site: Typically linked to respiratory or central nervous system infections.
  • A49.3 – Mycoplasma infection, unspecified site: Affects various systems, including respiratory, but may be coded here if the site remains unspecified.

If the specific strain of bacteria doesn’t fit these ICD-10 codes, please use A49.8 - Other bacterial infections of unspecified site. This code is meant for bacterial infection types that don’t have specific ICD-10 codes.

Are these bacterial infection ICD-10 codes billable?

All of these codes are valid and billable under the ICD-10-CM system and support clinical documentation and reimbursement.

Clinical information

Bacteria are microscopic, single-celled organisms. Most are harmless or even beneficial, helping us break down food, synthesize nutrients, and fend off viral agents. However, other specified bacterial agents are responsible for serious infectious diseases.

Examples include:

  • Skin infections (e.g., cellulitis)
  • Respiratory infections (e.g., pneumonia due to other gram negative organisms)
  • Urinary tract infections (UTIs)
  • Gram negative sepsis
  • Clostridium difficile colitis
  • Bacterial diseases transmitted through contaminated food
  • Diseases caused by agents as the cause of diseases classified elsewhere

Some pathogens, like Staphylococcus aureus and Escherichia coli, can lead to aggressive systemic illness or life-threatening conditions. Others, such as those responsible for viral encephalitis, may involve the central nervous system but be complicated by bacterial co-infections.

Synonyms include

  • Bacterial infection associated with peritoneal dialysis catheter
  • Bacterial infection due to human immunodeficiency virus infection
  • Bacterial infection of central nervous system
  • Bacterial infection of skin
  • Bacterial infectious disease
  • Bacterial respiratory infection
  • Bacterial sinusitis
  • Bacterial tenosynovitis
  • Bacterial tonsillitis

Popular codes for bacterial infection

  • Bacterial infection ICD 10
  • ICD 10 code for bacterial infection
  • Bacterial skin infection ICD-10
  • Bacterial skin infection ICD 10
  • ICD 10 bacterial infection

Related ICDs

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